Recently, many researches propose to employ attention based encoder-decoder models to convert a sequence of trajectory points into a LaTeX string for online handwritten mathematical expression recognition (OHMER), and the recognition performance of these models critically relies on the accuracy of the attention. In this paper, unlike previous methods which basically employ a soft attention model, we propose to employ a posterior attention model, which modifies the attention probabilities after observing the output probabilities generated by the soft attention model. In order to further improve the posterior attention mechanism, we propose a stroke average pooling layer to aggregate point-level features obtained from the encoder into stroke-level features. We argue that posterior attention is better to be implemented on stroke-level features than point-level features as the output probabilities generated by stroke is more convincing than generated by point, and we prove that through experimental analysis. Validated on the CROHME competition task, we demonstrate that stroke based posterior attention achieves expression recognition rates of 54.26% on CROHME 2014 and 51.75% on CROHME 2016. According to attention visualization analysis, we empirically demonstrate that the posterior attention mechanism can achieve better alignment accuracy than the soft attention mechanism.