Fabrice Meriaudeau

Papers from this author

A Deep Learning Approach for the Segmentation of Myocardial Diseases

Khawala Brahim, Abdull Qayyum, Alain Lalande, Arnaud Boucher, Anis Sakly, Fabrice Meriaudeau

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Auto-TLDR; Segmentation of Myocardium Infarction Using Late GADEMRI and SegU-Net

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Cardiac left ventricular (LV) segmentation is of paramount essential step for both diagnosis and treatment of cardiac pathologies such as ischemia, myocardial infarction, arrhythmia and myocarditis. However, this segmentation is challenging due to high variability across patients and the potential lack of contrast between structures. In this work, we propose and evaluate a (2.5D) SegU-Net model based on the fusion of two deep learning techniques (U-Net and Seg-Net) for automated LGEMRI (Late gadolinium enhanced magnetic resonance imaging) myocardial disease (infarct core and no reflow region) quantification in a new multifield expert annotated dataset. Given that the scar tissue represents a small part of the whole MRI slices, we focused on myocardium area. Segmentation results show that this preprocessing step facilitate the learning procedure. In order to solve the class imbalance problem, we propose to apply the Jaccard loss and the Focal Loss as optimization loss function and to integrate a class weights strategy into the objective function. Late combination has been used to merge the output of the best trained models on a different set of hyperparameters. The final network segmentation performances will be useful for future comparison of new method to the current related work for this task. A total number of 2237 of slices (320 cases) were used for training/validation and 210 slices (35 cases) were used for testing. Experiments over our proposed dataset, using several evaluation metrics such Jaccard distance (IOU), Accuracy and Dice similarity coefficient (DSC), demonstrate efficiency performance in quantifying different zones of myocardium infarction across various patients. As compared to the second intra-observer study, our testing results showed that the SegUNet prediction model leads to these average dice coefficients over all segmented tissue classes, respectively : 'Background': 0.99999, 'Myocardium': 0.99434, 'Infarctus': 0.95587, 'Noreflow': 0.78187.

Incorporating Depth Information into Few-Shot Semantic Segmentation

Yifei Zhang, Desire Sidibe, Olivier Morel, Fabrice Meriaudeau

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Auto-TLDR; RDNet: A Deep Neural Network for Few-shot Segmentation Using Depth Information

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Few-shot segmentation presents a significant challenge for semantic scene understanding under limited supervision. Namely, this task targets at generalizing the segmentation ability of the model to new categories given a few samples. In order to obtain complete scene information, we extend the RGB-centric methods to take advantage of complementary depth information. In this paper, we propose a two-stream deep neural network based on metric learning. Our method, known as RDNet, learns class-specific prototype representations within RGB and depth embedding spaces, respectively. The learned prototypes provide effective semantic guidance on the corresponding RGB and depth query image, leading to more accurate performance. Moreover, we build a novel outdoor scene dataset, known as Cityscapes-3i, using labeled RGB images and depth images from the Cityscapes dataset. We also perform ablation studies to explore the effective use of depth information in few-shot segmentation tasks. Experiments on Cityscapes-3i show that our method achieves promising results with visual and complementary geometric cues from only a few labeled examples.

Multiscale Attention-Based Prototypical Network for Few-Shot Semantic Segmentation

Yifei Zhang, Desire Sidibe, Olivier Morel, Fabrice Meriaudeau

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Auto-TLDR; Few-shot Semantic Segmentation with Multiscale Feature Attention

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Deep learning-based image understanding techniques require a large number of labeled images for training. Few-shot semantic segmentation, on the contrary, aims at generalizing the segmentation ability of the model to new categories given only a few labeled samples. To tackle this problem, we propose a novel prototypical network (MAPnet) with multiscale feature attention. To fully exploit the representative features of target classes, we firstly extract rich contextual information of labeled support images via a multiscale feature enhancement module. The learned prototypes from support features provide further semantic guidance on the query image. Then we adaptively integrate multiple similarity-guided probability maps by attention mechanism, yielding an optimal pixel-wise prediction. Furthermore, the proposed method was validated on the PASCAL-5i dataset in terms of 1-way N-shot evaluation. We also test the model with weak annotations, including scribble and bounding box annotations. Both the qualitative and quantitative results demonstrate the advantages of our approach over other state-of-the-art methods.

P2D: A Self-Supervised Method for Depth Estimation from Polarimetry

Marc Blanchon, Desire Sidibe, Olivier Morel, Ralph Seulin, Daniel Braun, Fabrice Meriaudeau

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Auto-TLDR; Polarimetric Regularization for Monocular Depth Estimation

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Monocular depth estimation is a recurring subject in the field of computer vision. Its ability to describe scenes via a depth map while reducing the constraints related to the formulation of perspective geometry tends to favor its use. However, despite the constant improvement of algorithms, most methods exploit only colorimetric information. Consequently, robustness to events to which the modality is not sensitive to, like specularity or transparency, is neglected. In response to this phenomenon, we propose using polarimetry as an input for a self-supervised monodepth network. Therefore, we propose exploiting polarization cues to encourage accurate reconstruction of scenes. Furthermore, we include a term of polarimetric regularization to state-of-the-art method to take specific advantage of the data. Our method is evaluated both qualitatively and quantitatively demonstrating that the contribution of this new information as well as an enhanced loss function improves depth estimation results, especially for specular areas.

Polarimetric Image Augmentation

Marc Blanchon, Fabrice Meriaudeau, Olivier Morel, Ralph Seulin, Desire Sidibe

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Auto-TLDR; Polarimetric Augmentation for Deep Learning in Robotics Applications

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This paper deals with new augmentation methods for an unconventional imaging modality sensitive to the physics of the observed scene called polarimetry. In nature, polarized light is obtained by reflection or scattering. Robotics applications in urban environments are subject to many obstacles that can be specular and therefore provide polarized light. These areas are prone to segmentation errors using standard modalities but could be solved using information carried by the polarized light. Deep Convolutional Neural Networks (DCNNs) have shown excellent segmentation results, but require a significant amount of data to achieve best performances. The lack of data is usually overcomed by using augmentation methods. However, unlike RGB images, polarization images are not only scalar (intensity) images and standard augmentation techniques cannot be applied straightforwardly. We propose enhancing deep learning models through a regularized augmentation procedure applied to polarimetric data in order to characterize scenes more effectively under challenging conditions. We subsequently observe an average of 18.1% improvement in IoU between not augmented and regularized training procedures on real world data.